Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGRTSIGVKIRDKVQDKVIAITGGARGIGLATAAALHNLGAKVAIGDIDEAMAKESGADL-----DLDMYGKLDVTDPDSFSGFLDAVERQLGPIDVLVNNAGIMPVG---RIVDEPDPVTRRILDINVYGVILGSKLAAQRMVPRGRGHVINVASLAGEIYAVGVATYCASKHAVVAFTDSARLEYRSAGVKFSMVLPSFVNTELIAGTGG------------IKGFKNAEPADIADAIVGLIVHPKPRVRVTKAAGSMIVAQRFMPRQVSEGLNRLLGGEHVFTDDVDMEKRRTYEARARGEE |
| 2CFC Chain:A ((1-238)) | ---------------MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQK-EIGTAAQVADAVMFLAGEDATYVNG---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119008 for 1858 contacts (-64.1/contact) +
2D Compatibility (PS) -22710 + (NN) -1727 + (LL) 4652
1D Compatibility (HY) -8800 + (ID) 3100
Total energy: -150693.0 ( -81.10 by residue)
QMean score : 0.478
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