Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVPARPTPLFADIADVSRRLAETGYLPDTATATAVFLADRLGKPLLVEGPAGVGKTELARAVAQATGSGLVRLQCYEGVDEARALYEWNHAKQILRIQAGSGDWEATKTDVFSEEFLLQRPLLTAIRRTEPTVLLIDETDKADIEIEGLLLEVLSDFAVTVP--ELGTLTATRAPFVLLTSNATRELSEALKRRCLYLHIDFPTPELERRILLSRVPELPEHFAEELVRIIGVLRGMQLKKVPSIAETIDWGRTVLALGLDTIDDAVVAATLGVVLKHQSDQQRATGELRLN---
5C3C Chain:B ((26-281))---------------------KEPYYRAVQDEIELYRAGYEARIPMMLKGPTGCGKSRFVEHMAWKLNRPLITIACNEDM---------------------------------TASDLVDGPLTVAARIG--AICYLDEIVEARQDTI-VVIHPLTDHRRVLPLEKKGELVEAHPDFQIVISY--NDLKQSTKQRFGALDFDYPKPDIEAEIVSHEA-GVDKDTAEKLVQIAQKARNLKGHGLDEGLSTRLLVYAGKLIAKGVDARAACTMTL-VNPITDDVDMRDALDTVVKTFF


General information:
TITO was launched using:
RESULT:

Template: 5C3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142705 for 1789 contacts (-79.8/contact) +
2D Compatibility (PS) -24200 + (NN) -6170 + (LL) 3748
1D Compatibility (HY) -5600 + (ID) 2400
Total energy: -177327.0 ( -99.12 by residue)
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_5C3C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C3C-query.scw
PDB file : Tito_Scwrl_5C3C.pdb: