Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVEL-VELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
3P48 Chain:A ((7-133))
--KVLKIQLRSASATVPTKGSATAAGYDIYASQDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQTG--AGVVDRDYTGEVKVVLFNHSQR-DFAIKKGDRVAQLILEKIVDDAQIVVVDS-----LE------------------
General information:
TITO was launched using:
RESULT:
Template:
3P48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91249 for 869 contacts (-105.0/contact) +
2D Compatibility (PS) -14033 + (NN) -9322 + (LL) -340
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -126144.0 ( -145.16 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_3P48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P48-query.scw
PDB file :
Tito_Scwrl_3P48.pdb
: