Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASRGQAVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRSVAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDAA----ALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA
3UF0 Chain:A ((27-272))
-FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELA-ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSF-QGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA-------
General information:
TITO was launched using:
RESULT:
Template:
3UF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169550 for 2117 contacts (-80.1/contact) +
2D Compatibility (PS) -26305 + (NN) -9724 + (LL) 372
1D Compatibility (HY) -10800 + (ID) 4550
Total energy: -220557.0 ( -104.18 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_3UF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF0-query.scw
PDB file :
Tito_Scwrl_3UF0.pdb
: