Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSEQSASIEHVDVLIVGAGISGTGAAYYLKTMQPAKTFAIVEARYPAIRSDSDLHTFSYEFKPWQHEKATASADAIMVHRGRSLAGGDRTLRHRRTRHHELRMVIIGSGATAVTLVPAMAQTAGAVTMPK
1W4X Chain:A ((10-47))
----RRQPPEEVDVLVVGAGFSGLYALYRLREL--GRSVHVIET---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1W4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20749 for 192 contacts (-108.1/contact) +
2D Compatibility (PS) -3728 + (NN) 3270 + (LL) 6488
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -19469.0 ( -101.40 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1W4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W4X-query.scw
PDB file :
Tito_Scwrl_1W4X.pdb
: