Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAAAAQGGGGGEPRRTEGVGPGVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKS-----QQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPK-SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLEAP |
| 3EB0 Chain:A ((6-373)) | --------------------------------------SKKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQDP--R---YKNRELDIMKVLDHVNIIKLVDYFYTT----NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV----AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRM-NPHY----VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS-----IPQLFNFSPYELSIIPGNVLNRILPK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195049 for 2363 contacts (-82.5/contact) +
2D Compatibility (PS) -32235 + (NN) -12812 + (LL) 3640
1D Compatibility (HY) -29200 + (ID) 4900
Total energy: -270556.0 ( -114.50 by residue)
QMean score : 0.636
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