Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDSKCDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQD--VYLVMELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMKKLQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMDWEERSKNGVVKDQPSDAAVSSNATPSQSSSINDISSMSTEQTLASDTDSSLDASTGPLEGCR |
| 3EB0 Chain:A ((6-372)) | ----------------------SKKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQ---DPRY---KNRELDIMKVLDHVNIIKLVDYFYTT-------NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY--V--RFPTLKAKDWRKILPEGT-----------PSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS------IPQLFNFSPYELSIIPGNVLNRILPK----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215920 for 2322 contacts (-93.0/contact) +
2D Compatibility (PS) -32325 + (NN) -15722 + (LL) 6576
1D Compatibility (HY) -26800 + (ID) 5150
Total energy: -289341.0 ( -124.61 by residue)
QMean score : 0.451
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