Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSRDQAHLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERETVESEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLAAPCRKHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDR-VQVAIKVISRDNL-LHQQMLQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSD-----EKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVG---ENTLCKVGDFGLARLIKEDVYLSHD-HNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTCWCRDPEQRPCFKALRERLSSFTSYENPT |
| 4CLJ Chain:A ((22-304)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDLKEVPRKNITLIRGLGHGAFGEVYEGQVS--PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR-----GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161379 for 2081 contacts (-77.5/contact) +
2D Compatibility (PS) -27994 + (NN) -16540 + (LL) 12900
1D Compatibility (HY) -19200 + (ID) 5250
Total energy: -217463.0 ( -104.50 by residue)
QMean score : 0.510
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