Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSV--STNYNTIVEAMKSKK---VDVGFLPPTAY-TLAHDQ-KA------ADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLK------GKKIALQDV--TSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQ----------------AIP------NDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVY------SHEGYTETKDSNFDIVREYEKLVKDMK |
| 2QPQ Chain:A ((8-295)) | --------------------------------------------KPLDIIVTFPPGGGTD---MLARLIGNYLTESLGQTAVVENRPGASGNVGARLVADRAPDGYSLLMVNSSFAVNPGVFRNLPFDPKKDFAAVIN----------------VAYVPSVFVVPAGSKYKTLGELMAAAKQTNTQVTYGSCGNGTPQ-HLAGELLNVS-AKTHMV----HVPYKGCGPALNDVLGSQIGLAVVTASSAIPFIKAG-----KLQALAVTSKERSALLPEVPTVAEQGVAGYELNQWHGLLVPGATPMAVRQKLYDGIAKVMQRDDVQKKLADLGYSTASDGPEVFQKMVETDIDRFSALTKQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38696 for 1937 contacts (-20.0/contact) +
2D Compatibility (PS) -25085 + (NN) -2923 + (LL) 4304
1D Compatibility (HY) -10000 + (ID) 1850
Total energy: -74250.0 ( -38.33 by residue)
QMean score : 0.415
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