Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSVIILAAGKGTRMHSSLPKTLHTICGEPMLFYILEVAFSIS-NDVHLVLHHQQERIKEAVSKRFKGVIFHAQIVEKYSGTGGAIMQ-ENKTPIPTQHERVLILNADMPLITKDALTPLLESH-----NNAIGLLHLADPKGYGRVILE-NHQVKKIVEEKDANDEEKTIKSVNAGVYFFERKFLERYLPKLHDQNAQKEYYLTDLIALGIKGNEKIDAIFLEEECFLGVNSQTERA--KAEEIMLERLRKNAMDLGVVMQLPSSIYLEKGVSFKGECVLEQGVRLIGNCLIENA------------RIKAYSVI-----EESQIINSSV-GPFAHARPKSVIC-DSHVGNFVETKNAKL-QGTKAGHLSYLGDCEIGKNTNVGAGVITCNYDGKKKHQTIIGENVFIGSDSQLVAPINIGSNVLIGSGTTITKDIPSGSLSLSRTPQTNIENGYFKFFKKP |
| 1HM9 Chain:A ((11-464)) | SNFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAG---QTEFVTQSEQ--LGTGHAVMMTEPILEG--LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETDNPFGYGRIVRNDNAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYITDVIGIFRETGEKVGAYTL-KDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVNPEATYIDIDVEIAPEVQIEANVILKGQTKIGAETVLTNGTYVVDSTIGAGAVITNSMIEESSVADGVTVGPYAHIRPNSSLGAQVHIGNFVEVKGSSIGENTKAGHLTYIGNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADAIAIGRGRQINKDEYATRLPHHP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285631 for 3517 contacts (-81.2/contact) +
2D Compatibility (PS) -46538 + (NN) -16549 + (LL) 468
1D Compatibility (HY) -22000 + (ID) 8350
Total energy: -378600.0 ( -107.65 by residue)
QMean score : 0.501
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