Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METRELKNGQIMMIRKATKE-DSSNIITYLNEVAGETDYLSFGQGEFAFSIAEEAEYIEESDKNPGSVMLLCF-IDDELASISQLIGHIKK-RELHTSELAISIRKKYWGLGIGTICMEELIKYAKSSEYLKLIYLEVVTENKRAINLYKKFGFIEAGEIPALMQVDRRYLDVTMMYLVI
2JLM Chain:A ((6-172))
-------TTTLFRFVECTEDQHALEILEILNDAIINSTALYD---YKPRSKESMAAWFATKRQ-NNFPIIGAVNEVGQLLGFASWGSFRAFPAYKYTVEHSVYIHKDYRGLGLSKHLMNELIKRAVES-EVHVMVGCIDATNVASIQLHQKLGFIHSGTIQQAGFKFGRWLDAAFYQLT-
General information:
TITO was launched using:
RESULT:
Template:
2JLM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110518 for 1166 contacts (-94.8/contact) +
2D Compatibility (PS) -17260 + (NN) 974 + (LL) 812
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -132992.0 ( -114.06 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_2JLM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JLM-query.scw
PDB file :
Tito_Scwrl_2JLM.pdb
: