Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAI---HTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
2DXE Chain:A ((7-155))
TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELFEYPRAADWF-
General information:
TITO was launched using:
RESULT:
Template:
2DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71007 for 1109 contacts (-64.0/contact) +
2D Compatibility (PS) -15554 + (NN) -3398 + (LL) 204
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -109555.0 ( -98.79 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DXE-query.scw
PDB file :
Tito_Scwrl_2DXE.pdb
: