Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MAIVKATDQSFSAE---TSEGVVLADFWAPWCGPCKMIAPVLEELDQEMGDK--LKIVKIDVDE-NQETAGKYGV-MSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL-
2TRX Chain:A ((1-108))SDKIIHL-TDDSFDTDVLKAD-GAILVDFWAEWCGPCKMIAPILDEIADEYQ--GKLTVAKLNID-QNPGTAPKYGIR-GIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA


General information:
TITO was launched using:
RESULT:

Template: 2TRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 399 24414 61.19 249.12
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 61.19
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_2TRX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2TRX-query.scw
PDB file : Tito_Scwrl_2TRX.pdb: