Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTAAPRWILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLRTAARRCPEATFL-PSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPDDPI------------------------------------EVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANWMAIM-GDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTEVSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTATFYTRTKIRKLQA----------PSTDPDVITAAARHVLDLFE------LDRPVRLLGVRLE-LA |
1T3N Chain:A ((1-388)) | -----SRVIVHVDLDCFYAQVEMISNPELKDKPLGVQQKY-------LVVTCNYEARKLGVKKLMNVRDAKEKCPQLVLVNGEDLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQSDELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVRDLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPPQSFSEEDSFKKCSS-EVEAKNKIEELLASLLNRVCQDGRKPHTVRLIIRRYSSEKHYGRESRQCPIPSHVIQKLGTGNYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153411 for 2482 contacts (-61.8/contact) +
2D Compatibility (PS) -36802 + (NN) -23686 + (LL) 428
1D Compatibility (HY) -19600 + (ID) 4650
Total energy: -237721.0 ( -95.78 by residue)
QMean score : 0.420
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