Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDP-QVAEETAAAIRSLGRRSLALGVDVSDGDSVRAMVERVATEF------GRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQAELPLMQAQRWGRIVNLSSIAGKVGLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGMWRGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLA--CAPHVTGQAIAVDGGFSL
3ICC Chain:A ((2-255))
-------NSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM-M-------KQ----YATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSCL
General information:
TITO was launched using:
RESULT:
Template:
3ICC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154596 for 2064 contacts (-74.9/contact) +
2D Compatibility (PS) -26271 + (NN) -10446 + (LL) 1340
1D Compatibility (HY) -14400 + (ID) 4300
Total energy: -208673.0 ( -101.10 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_3ICC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ICC-query.scw
PDB file :
Tito_Scwrl_3ICC.pdb
: