Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRH--ELE--VY-HDGE-LLR----YFNYS----SVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER--HAIDQVRLN--DG-RVLRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFAL-APCVAER-NRL--YVD-SQGGLAYFYPIGF-DRARLVVSFPREEARELMADTRGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
| 3IHG Chain:A ((1-368)) | MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRE-SLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHHPE-FKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTP-QRCVELIGLALDA--PEVKPEL--VDI-QGWEMAARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGA-GLLDTYEDERKVAAELVVAEALA--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215380 for 2950 contacts (-73.0/contact) +
2D Compatibility (PS) -36111 + (NN) -4513 + (LL) 2008
1D Compatibility (HY) -7600 + (ID) 4200
Total energy: -265796.0 ( -90.10 by residue)
QMean score : 0.393
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