Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTPVVLITGAAGGLGRAIAKRFAQSHWRIAATDVDKEGLHALNAQVPLDASGVADLRSADNCHTLMSKILARTGRLDALVNAAGVWREGPVENFTEEDFDLVLGVNLKASFYMCQAAIPYLKE-NQGSIVNISSDSGRQAYRGSAAYCASKAALTMLSKTLALELAEQGVRVNAVSPADIATPMLDYQAERYGMGNPDGYKRALLKDYPQGKAARFIRPEEVAELVWYLCGPQAEAITGADLAVDFGLSAGR |
| 2D1Y Chain:A ((4-247)) | FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-I-GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIA----------RRDWEDLHALR---RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMTA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144475 for 2094 contacts (-69.0/contact) +
2D Compatibility (PS) -25079 + (NN) -10394 + (LL) -60
1D Compatibility (HY) -9600 + (ID) 4250
Total energy: -193858.0 ( -92.58 by residue)
QMean score : 0.538
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