Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVR------NQEKAACLKLCGNLGQISIFKGDFFDEKLILESVEECNVVINLVGILYEVKEHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGIE------NSKLSEYAQSKLKGEKAVTAAFPEAIIIKPSLVFGKEDNFFTKFARLATILPFLPLIGSGTTKFQPICVTDLAEMVYRIINLNKQDKKIYNIGGPK-IYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEKSTDFEAIKIRPLSIENVVPEYLKVYKKY |
| 1QYC Chain:A ((2-308)) | GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG-ANIVHGSIDDHASLVEAVKNVDVVISTVG-----------SLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKT--LEKAYVPEEEVLKLIADTPFPANISIAISHSIF-------VKGDQTNFEIGPAGVEASQLYPDVKYTTVDEYLSNFV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206779 for 2424 contacts (-85.3/contact) +
2D Compatibility (PS) -31600 + (NN) -8213 + (LL) 2124
1D Compatibility (HY) -5600 + (ID) 2800
Total energy: -252868.0 ( -104.32 by residue)
QMean score : 0.408
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