Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIAISGGGTGGHIYPALAFIKEVQRRHPNVEFLYIGTENGLEKKIVER-ENIPFRSIEITGFKRKLSFENVKTVMRFLKGVKKSKSYLAEFKPDAVIGTGGYVCGPVVYAAAKMGIPTIVHEQNSLPGITNKFLSKYVNKVAICFEEAKSHFPSEKVVFTGNPRASEVVSIKTGRSLAEFGLSEDKKTVLIFGGSRGAAPINRAVIDMQDVLKTRDY-----QVLYITGEVHYEKVMNELKSKGAADNMVTKPFLHQMPEYLKAIDVIVARAGATTIAEITALGIPSVLIPSPYVTANHQEVNARSLGQHDAAIVLKETELSGEKLIEALDRIVLNEQTLKEMSERTKSLGVPDAAARLYSVLEELKK----
4X1T Chain:A ((6-389))KKVLILMSDTGGGHRASAEAIRAAFNQEFGDEYQVFITQPDIIISVHPLMQHVPLRVLRSKGLLKKIVFTTVIT--------DLSTCHPTWFHKLV-----TRCYCPSTEVAKRAQKAGLETSQIKVYGLPVR--------------------PS----FVKPVR-------PKVELRRELGMDENLPAVLLMGGGEGMGPIEATARALADALYDKNLGEAVGQVLIICG--RNKKLQSKLSSLDWKIPVQVKGFITKMEECMGACDCIITKAGPGTIAEAMIRGLP--IILNGYI-AGQEAGNVPYVVENGCGKFSKSPKEISKIVADWFGP---ASKELEIMSQNALRLAKPEAVFKIVHDMHELVRKKNS


General information:
TITO was launched using:
RESULT:

Template: 4X1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1814 -168547 -92.91 -541.95
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -92.91
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4X1T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X1T-query.scw
PDB file : Tito_Scwrl_4X1T.pdb: