Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGRVAGIVINPAAWTHTSVALRDALAAVE-LPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
1D0I Chain:A ((1-150))
PRSLANAPIMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG---
General information:
TITO was launched using:
RESULT:
Template:
1D0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125325 for 1203 contacts (-104.2/contact) +
2D Compatibility (PS) -15880 + (NN) -3535 + (LL) 432
1D Compatibility (HY) -12800 + (ID) 4000
Total energy: -161108.0 ( -133.92 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_1D0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D0I-query.scw
PDB file :
Tito_Scwrl_1D0I.pdb
: