Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGTARGPGRKDAGPPGAGLPPQQRRLGDGVYDTFMMIDETKCPPCSNVLCNPSEPPPPRRLNMTTEQFTGDHTQHFLDGGEMKVEQLFQEFGNRKSNTIQSDGISDSEKCSPTVSQGKSSDCLNTVKSNSSSKAPKVVPLTPEQALKQYKHHLTAYEKLEIINYPEIYFVGPNAKKRHGVIGGPNNGGYDDADGAYIHVPRDHLAYRYEVLKIIGKGSFGQVARVYDHKL-RQYVALKMVRNE----KRFHRQAAEEIRILEHLKKQDKTGSMNVIHMLESFTFR-----NHVCMAFELLSIDLYELIKKNKFQGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSSTKVIDFGSSCFEYQ--KLYTYIQSRFYRAPEIILGS-RYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLGMPPPKLLEQS--KRAKYFINSKGIPRYCSVTTQADGRVVLVGGRSRRGKKRGPPGSKDWGTALKGCDDYLFIEFLKRCLHWDPSARLTPAQALRHPWISKSVPRPLTTIDKVSGKRVVNPASAFQGLGSKLPPVVGIANKLKANLMSETNGSIPLCSVLPKLIS |
| 4QNY Chain:A ((19-316)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDRYLLERIIGAGSYGVVIRARDTKSDNRLVAMKRVNKEIFEEVILAKRILREIKLLAHFN------DDNIIGLRNILTPEDPENFDHFYIVMDIMETDLKQVLRSG--QELTEAHIQFFIYQALRALHIIHSAGVIHRDITPANILVNTNCD--LKICDFGLAKEE--GEYMTDYVTMRWYRAPELVMEDKDYSAQIDVWGIGCILGELLGSRPLFQGKDRVNQLDKIVDVIGTPSEEDINSVGSSAAQKYLKKKSH-----------------------------RPQADWRQRYPTA-SPEALDLLRHMLVFNPKRRITVLQAMRHPFLEQLHDDYALFRFDTIVDVKRAIYEESVKF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188559 for 2191 contacts (-86.1/contact) +
2D Compatibility (PS) -30414 + (NN) -18983 + (LL) 8760
1D Compatibility (HY) -22000 + (ID) 4300
Total energy: -255496.0 ( -116.61 by residue)
QMean score : 0.450
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