Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSRDQAHLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERETVESEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLAAPCRKHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDR--VQVAIKVISRDNL-LHQQMLQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMAKGSLLELLRDS-----DEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVG---ENTLCKVGDFGLARLIKEDVYL-SHD-HNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTCWCRDPEQRPCFKALRERLSSFTSYENPT |
| 3L9P Chain:A ((63-345)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SDLKEVPRKNITLIRGLGHGAFGEVYEGQVSG-SPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159812 for 2131 contacts (-75.0/contact) +
2D Compatibility (PS) -28632 + (NN) -15774 + (LL) 12620
1D Compatibility (HY) -19600 + (ID) 5300
Total energy: -216498.0 ( -101.59 by residue)
QMean score : 0.486
|
|
|