Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
2OL1 Chain:A ((9-131))
---------PVRFVKE--TNRAKSPTRQSPGAAGYDLYSAYD--YTIPPGERQLIKTDISMSMPKFCYGRIAPRSGLSLK-GIDIG--GGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL-----------------
General information:
TITO was launched using:
RESULT:
Template:
2OL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75460 for 811 contacts (-93.0/contact) +
2D Compatibility (PS) -12893 + (NN) -3438 + (LL) 816
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -101225.0 ( -124.82 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_2OL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OL1-query.scw
PDB file :
Tito_Scwrl_2OL1.pdb
: