Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAG--------TLEAKAKPLEKLLSKEL-G--IPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQKAADLLLQAQRFGVKEDGSASKELVDSYKSEILVKKDSKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKLTQAIPNDTISVRPDMDKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
| 2V25 Chain:A ((29-257)) | -------------------------------------GKLESIKSKGQLIVGVKNDVPHYALLDQATGEIKGFEVDVAKLLAKSILGDDKKIKLVA-VNAKTRGPLLDNGSVDAVIA-TFTITPERKR----IY-NFSE------------PYYQDAIGLLVLKEKKYKSLADMKGANIGVAQAATTKKAI--GEAAKK-IGID----VKFSEFPDYPSIKAALDAKRVDAFSVDKSILLGYVDD------KSEILPDSFEPQSYGIVTKKD-DPAFAKYVDDFVKEHKN--EIDALAKKW---------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2V25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -46905 for 1812 contacts (-25.9/contact) +
2D Compatibility (PS) -23769 + (NN) -7518 + (LL) 5800
1D Compatibility (HY) -5200 + (ID) 2100
Total energy: -79692.0 ( -43.98 by residue)
QMean score : 0.311
|
|
|