Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVTETIIRFENVTKQFDN-DPPVLDNVSFEIEKGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYLGDKVIN-----QIPANKRPVNTVFQDYALFPHLNVYENVAFGLRIKKLKKEAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILLDEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQSGTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVVIRPEDLEIT------SAEKGQLQVTVDWMLFRGVHYEVGCIDIDGNEWLVHTT--RKVRVGDKIGLAFEPEAIHVMRLGETEEEFDKRLDSYDEVQ
1OXS Chain:C ((1-352))--MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNE-GVVIGSLRFP----VSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQG-GLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK------------------


General information:
TITO was launched using:
RESULT:

Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169974 for 2762 contacts (-61.5/contact) +
2D Compatibility (PS) -37055 + (NN) -12879 + (LL) 1880
1D Compatibility (HY) -25200 + (ID) 5850
Total energy: -249078.0 ( -90.18 by residue)
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_1OXS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OXS-query.scw
PDB file : Tito_Scwrl_1OXS.pdb: