Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VTETIIRFENVTKQFDN-DPPVLDNVSFEIEKGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYLGDKVIN-----QIPANKRPVNTVFQDYALFPHLNVYENVAFGLRIKKLKKEAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILLDEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQSGTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVVIRPEDLEIT------SAEKGQLQVTVDWMLFRGVHYEVGCIDIDGNEWLVHTT--RKVRVGDKIGLAFEPEAIHVMRLGETEEEFDKRLDSYDEVQ |
1OXS Chain:C ((1-352)) | --MVRIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIGEINELEGKVTNE-GVVIGSLRFP----VSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQG-GLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169974 for 2762 contacts (-61.5/contact) +
2D Compatibility (PS) -37055 + (NN) -12879 + (LL) 1880
1D Compatibility (HY) -25200 + (ID) 5850
Total energy: -249078.0 ( -90.18 by residue)
QMean score : 0.523
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