Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-D-----GKLVADDKAGTELLTFMSELQKNKLLLAS----KATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLK-FVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
3DM0 Chain:A ((3-389)) | ---------------------------------EEGKLVIWINGD-KGYNGLAEVGKKFEKD-TGIKVTVEHP---DKLEEKFPQVAATGDGPDIIF-WAHDRFGGYAQSGLLAEITPAAAF----QDKLYPFTWDAVRY-NGKLIAYPIAVEALSLIYNKDLLPN-----PPKTWEEIPALDKELKAKGKS--ALMFN--LQEPYF-TW-----PLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS----A--VNYGVTVLPTFKGQP----SKPFVGVLSAGINAASPN--KELAKEFLENYLLTDE-GLEAVNKDKPLGAVALKSYEEEL-----AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRT-AVINAASGRQTVDAALAAAQTNAAAGLV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44294 for 3184 contacts (-13.9/contact) +
2D Compatibility (PS) -38881 + (NN) -17573 + (LL) 4248
1D Compatibility (HY) -8800 + (ID) 3600
Total energy: -108900.0 ( -34.20 by residue)
QMean score : 0.418
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