Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFETVKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANATGRSYIYHQKALHPIPEGSVMGIPTDKEALLA-STLVSEIGKA-RAL--QEPTM-ERNNQERDQALGDFFEARFGKE-LVKTIIEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLKESSMQTTGTKATIGAFRTLEGGLDALPKAIAAALPKENLHTAKQATEIVKKNNAYEISFADGDKMEADGVIIAATHDALIHLLA-ETTT----EPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACTWVQKKWPHMVPKNKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEIMDLHA-APLFYEVSRMKSAMPQYLVNHQDR------LKQLKKNI-KTDYPGVFFAGMSYE---GVGIPDCIAGAQTAAKELVDYLEEV |
| 2YG5 Chain:A ((6-451)) | -RDVAIVGAGPSGLAAATALRKA--GLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFERYREGESVYISSAGERTRYTGD---SFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAAS----AGSFSH-LVD---E------DFILDKRVIGGMQQVSIRMAEALGDDV-FLNAPVRTVKWNESGATVLADGDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED-GLSGTGFGA---SEVVQEVYDNTNH----EDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAEEPVVYYESDWGSE-E-WTRGCYAASFDLGGLHRYGADSRTP-VGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146088 for 3789 contacts (-38.6/contact) +
2D Compatibility (PS) -45019 + (NN) -2029 + (LL) 2060
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -204476.0 ( -53.97 by residue)
QMean score : 0.422
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