Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHS-----------KNGYYDGLIFHRVIPEFMIQGGDPD-GRGTGGESIWGESFEDEFSTEAFNLRGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
1A58 Chain:A ((19-176))
---------------------LAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAP---------------------------HLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGEL
General information:
TITO was launched using:
RESULT:
Template:
1A58.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41060 for 1093 contacts (-37.6/contact) +
2D Compatibility (PS) -15371 + (NN) -7453 + (LL) 3328
1D Compatibility (HY) -10000 + (ID) 3450
Total energy: -74006.0 ( -67.71 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_1A58.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A58-query.scw
PDB file :
Tito_Scwrl_1A58.pdb
: