Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAKRAIPVRERNIVLIGFMGVGKTTIGQLVAKKLYRDFIDIDQQIEKDFNMSIPEIFEKKGEDFFRKTEKEYILDICHHKRFKIVSLGGGSFKQEEIRNCCLENCLVLHLDLSWENWKQRADLLIESRPVLHNRSMDEMEQLFNERKVIYDKHNSKVATDNLSPEEVADYIVETLKIGWDLYQPM
2PT5 Chain:A ((1-165))-----------MRIYLIGFMCSGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQIFEKKGEAYFRKLEFEVLKDLSEKE-NVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKDSK-ERPLLKR-PLDEIKNLFEERRKIYSKADIKVKGEK-PPEEVVKEILLSLEGNA------


General information:
TITO was launched using:
RESULT:

Template: 2PT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 793 -94057 -118.61 -570.04
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -118.61
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_2PT5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PT5-query.scw
PDB file : Tito_Scwrl_2PT5.pdb: