Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTP--RQTTADGFEMQFGTNHLGHFALTGLLIDRLLPV-AGSRVVTISSVGHRIRAAIHFDDLQWERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTEVVRNMPRPL----------V-A-VA-AILAPLMQDAELGALPTLRAATDPA-VRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
| 3WDS Chain:A ((7-258)) | --------IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-----NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV-------------GAPLLAHYSASKFAVFGWTQALAREMAPK-NIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTG----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109426 for 2134 contacts (-51.3/contact) +
2D Compatibility (PS) -25909 + (NN) -11508 + (LL) 4700
1D Compatibility (HY) -6400 + (ID) 3100
Total energy: -151643.0 ( -71.06 by residue)
QMean score : 0.423
|
|
|