Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKYDG-SQNIISNASCTTNCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVID-DQAKVVSWYDNEWGYSNRLVDLVTLVGKSL |
3CMC Chain:O ((1-332)) | -AVKVGINGFGRIGRNVFRAALKN-----PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVN-GNNLVVNGKEIIVKAER-DPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASCTTNCLAPFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPNVSVVDLVAELEKEVTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNETGYSHRVVDLAAYIASK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168220 for 2968 contacts (-56.7/contact) +
2D Compatibility (PS) -35288 + (NN) -12278 + (LL) 540
1D Compatibility (HY) -32400 + (ID) 10050
Total energy: -257696.0 ( -86.82 by residue)
QMean score : 0.517
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