Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGLWTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTTWN--------KGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATVVGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGRLEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA
3Q1X Chain:A ((100-267))
-KRTLKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTVY-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119980 for 1279 contacts (-93.8/contact) +
2D Compatibility (PS) -17184 + (NN) -6579 + (LL) 5932
1D Compatibility (HY) -16000 + (ID) 3350
Total energy: -157161.0 ( -122.88 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_3Q1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q1X-query.scw
PDB file :
Tito_Scwrl_3Q1X.pdb
: