Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDNHIDVLINGCGIGGAMLAYLLGRQGH-RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE-LLRYFNY-SSVDARGYFILMPCESLRRLVLEKIDG-EATVEMLFETRIEAVQRDERHAIDQVRLNDG----RVLRPRVVVGADGIASYVRRRLLDIDVERRPY-PSPMLVGTFALAPCVAERNRLYV-DSQ-GGLAYFYPIGF-------DRARLVVSFPREEARELMA---DTRGESLRRRLQRFVGDESAE--AIAAVTG--TSRFKGIPIGYLN-LDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATS-LEDRQRFAGVFDTALQGSSRTPEALGGERSYQPVRSPAPLG |
3C96 Chain:A ((4-395)) | ----PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPT-HELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERD--GRVLIGARDGHGKPQALGADVLVGADGIHSAVRA-HLHPDQRPLSHGGITMWRGVTEF-DRFLDGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNR-DGRLEDVLPFFADWDLGWFDIRDLLTRNQLI-LQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNA----DVAAALREYEEARRPTANKIILANREREKEEWAAA------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221924 for 2979 contacts (-74.5/contact) +
2D Compatibility (PS) -36490 + (NN) -6894 + (LL) 2084
1D Compatibility (HY) -11600 + (ID) 3750
Total energy: -278574.0 ( -93.51 by residue)
QMean score : 0.440
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