Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKHHSKKAILKLTLITTSILLMHSNQVNAEEQELKNQEQSPVIANVAQQPSPSVTTNIVEKTSVTAASASNTAKEMGDTSVKNDKTEDELLEELSKNLDTSNLGADLEEEYPSKPETTNNKESNVVTNASTAIAQKVPSAYEEVKPESKSSLAVFDTSKITKLQAITQRGKGNVVAIIDTGFDINHDIFRLDSPKDDKHSFKTKAEFEELKAKHNI-TYGKWVNDKIVFAHNYANNTETVADIAAAMKDGYGSEAKNISHGTHVAGIFVGNSKRPAI----NGLLLEGAAPNAQVLLMRIPDKIDSDKFGEAYAKAITDAVNLGAKTINMSLGKTADSLIALNDKVKLALKLASEKGVAVVVAAGNEGAFGMDYSKPLSTNPDYGTVNSPAISEDTLSVASYESLKTISEVVETTIEGKLVKLPIVTSKPF-DKGKAYDVVYAN---YGAKKD--FEGKDFKGKIALIERGGGLDFMTKITHATNAGVVGIVIFNDQEKRGNFLIPYRELPVGVISKVDGERIKN-------TSSQLTFNQSFEVVDSQGGNRMLEQSSWGVTAE--GAIKPDVTASGFEIYSSTYNN--------------QYQTMSGTSMASPHVAGLMTMLQSHLAEKYKGMNLDSKKLLELSKNILMSSATALYSE-------EDKAFYSPRQQGAGVVDAEKAIQAQYYVTG-----------------------------------NDGKAKINLK-RVG-----DKFDITVTIHKLVEGVKELYYQANVATEQVNKGKFALKPQALLDTNWQKVILRDK-ETQVRFTIDASQFSQKLKEQMANGYFLEGFVRFKEAKDSNQELMSIPFVGFNGDFANLQALETPIYKTLSKGSFYYKPNDTTHKDQLEYNESAPFESNNYTALLTQSASWGYVDYVKNGGELELAPESPKRIILGTFENKVEDKTIHLLERDAANNPYFAISPNKDGNRDEITPQATFLRNVKDISAQVLDQNGNVIWQSKVLPSYRKNFHNNPKQSDGHYRMDAFQWSGLDKDGKVVADGFYTYRLRYTPVAEGANSQESDFKVQVSTKSPNLPLLAQFDETNRTLSLAMPKESSYVPTYRLQLVLSHVVKDEEYGDETSYHYFHIDQEGKVTLPKTVKIGESEVAVDPKALTLVVEDKAGNFATVKLSDLLNKAVVSEKENAIVISNSFKYFDNLKKESMFISKEGKVVNKNLEEITLVKPQTTVTTQSLSKEITKSGNEKVLTSTNNNSSRVAKIISPKHNGDSVNHTLPSTSDRATNGLFVGTLALLSSLLLYLKPKKTKNNSK |
| 3I6S Chain:A ((13-643)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------SSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGIC-------KPGTQFNASMCNRKLIGANYFNKGILANDP---TVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE--GTFTSDLIAAMDQAVADGVDMISISYGYRFIPL--YEDAISIASFGAMMKGVLVSASAGNRGPGI---------------GSLNNGSPWILCVASGHTDRTFAGTLTLGNG---LKIRGWSLFPARAFVRDSPVIYNKTLSDCSSEELLSQVENPENTIVICDDN--GDFSDQMRIITRARLKAAIFISEDPGVFR--SATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQET--YLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKA----AHPE--WSPSA----IRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHCSNPSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVG--AATYKAKLKAP----KNSTISVS--------PQILVFKNNEKQSYTLTIRYIGD-----------SRNVGSITWVEQN--GNHSVRSPIVTSPIIEVW------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116992 for 4962 contacts (-23.6/contact) +
2D Compatibility (PS) -57357 + (NN) -14122 + (LL) 39512
1D Compatibility (HY) -8800 + (ID) 5500
Total energy: -163259.0 ( -32.90 by residue)
QMean score : 0.387
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