Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSKRGRPRDEGTHKAILSAAYDLLLEKGFDAVTVDKIAERAKVSKATIYKWWSNKAAVIMDSFLSTATDRL-PVPDTGSSVQDIVTHATNLARFLTS-REGTVIKELIGAGQLDEKLAEEYRTRFFQPRRLQAKGLLEKGIQKGELRENLDIEVSIDLIYGPIFYRLLITGDEV-NDSYVRDLVMNAFKGVQATSATESM
4JKZ Chain:A ((11-188))---------SEKSRVAIVEATRALLLERGFDGLSIEAVAAKAGVGKQTIYRWWPSRHALVADVLLEDADKILARMPKTDDVTADLASWAGTLAAALTTRRGHAMLKTLMAASLEHEDTAARL----REGFSRPLIESVRDRLRDEDIDAD-HAQAAADALLGAVVNAVLSEGRSYSR-QRAETSARIIVAGLR--------


General information:
TITO was launched using:
RESULT:

Template: 4JKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 684 -93273 -136.36 -532.99
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -136.36
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_4JKZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JKZ-query.scw
PDB file : Tito_Scwrl_4JKZ.pdb: