Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMPLPNKTTGVTFLHQIQSSELETLTRPPLKISLERPLGEMYVENNRTGIFNYPEGTTYDFAAAAAPVYSSASLSYAASSETFGSSSLTGLHTLNNVPPSPVVFLAKLPQLSPFIHHHGQQVPYYLESEQGTFAVREAAPPTFYRSSSDNRRQSGRERMSSANDKGPPSMESTKETRYCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRLLKHKRQKEEQEQKNDVDPSEIRTASIWVNPSVKSMKLSPVLSLTAEQLISALMEAEAPIVYSEHDSTKPLSEASMMTLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMVGLIWRSVEHPGKLSFAPNLLLDRNQGRCVEGLVEIFDMLVTTATRFRMMRLRGEEFICLKSIILLNSGVYTFLSSTLESLEDTDLIHIILDKIIDTLVHFMAKSGLSLQQQQRRLAQLLLILSHIRHMSNKGMEHLYSMKCKNVVPLYDLLLEMLDAHRIHTPKDKTTTQEEDSRSPPTTTVNGASPCLQPYYTNTEEVSLQSTV |
| 2R6Y Chain:A ((3-246)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LALSLTADQMVSALLDAEPPILYSEYDP-------SMMGLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLESAWLEILMIGLVWRSMEHPGKLLFAPNLLLDRNQGKSVEGMVEIFDMLLATSSRFRMMNLQGEEFVCLKSIILLNSGVYTFLSSTLKSLEEKDHIHRVLDKITDTLIHLMAKAGLTLQQQHQRLAQLLLILSHIRHMSNKGMEHLYSM-----VPLYDLLLEMLDAHRL--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192902 for 1751 contacts (-110.2/contact) +
2D Compatibility (PS) -25299 + (NN) -18686 + (LL) 17536
1D Compatibility (HY) -37200 + (ID) 9550
Total energy: -266101.0 ( -151.97 by residue)
QMean score : 0.539
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