Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSN---------------------------QPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
3ZF6 Chain:A ((41-207))
---------TLQVKLL--SKNARMPERNHKTDAGYDIFSAET--VVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIE--TGKIAAGYHGNLGINIKNDHEDDKMQTIFLRNICNEKIFEKERHLYKLGSYRIEKGERIAQLVIVPIWTPELKQVEEFE-SVSERGEKGFGSCGV
General information:
TITO was launched using:
RESULT:
Template:
3ZF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99776 for 862 contacts (-115.7/contact) +
2D Compatibility (PS) -15110 + (NN) -2261 + (LL) 600
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -126347.0 ( -146.57 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3ZF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZF6-query.scw
PDB file :
Tito_Scwrl_3ZF6.pdb
: