Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDERIISSETVDAEEVSFETSLRPQNLSQYIGQDKVKNNLTVFIEAATL-------RNEALDHVLLYGPPGLGKTTLAMVIASEMGSQIKTTSGPAIER------PGDLATILTSL--EPGDVLFIDEIHRLSRA-----IEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGTPRI-ANRLLKRVRDFAQVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFRGGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIVTETAYNHLGISYEKEV |
| 3D8B Chain:A ((75-315)) | ------------------MDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQESSRRIKTEFLVQLDG------------------SEDRILVVGATNRPQEIDEAARRRLVKRLYIPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRS--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91659 for 1518 contacts (-60.4/contact) +
2D Compatibility (PS) -21457 + (NN) -7713 + (LL) 9456
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -120473.0 ( -79.36 by residue)
QMean score : 0.443
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