Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVGVPKEIKNNENRVAMTPASVFSYVNAGHTVYVEKDAGIGSNYQDADFVQAGAKIVETAKEAW-DVDMVVKVKEPIAS-EYTYFKEGLLLFTYLHLANEPTLAKALMESKVNSVAYETVELADHTLPLLSPMSEVAGRMAAQIGAQFLQRTNGGMGVLLGGVPGVERSEVVIIGGGIAGTNAAKIAAGLGANVTILDMNLKRLRELDDIFGN--------QVQTLMSNDFNIETAVKKADLVIGAVLIPGAKAPKLVKEHVVKQMIPGSVLVDIAIDQGGIFETTDHVSTHDNPTYEKYGVLHYAVANMPGAVPRTSTLALTNATLPFGLKLANQ--GLEAAVQNDPFLLRGLNTYQGHITYKAVADSLDLPYTDSKELI |
| 1PJC Chain:A ((1-361)) | MEIGVPKEIKNQEFRVGLSPSSVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWS-REMVVKVKEPLP-AEYDLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLERQQGGRGVLLGGVPGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSN--------SAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHP-TSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLANQGL---KALETDDALAKGLNVQAHRLVHPAVQ-QVFPDLA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231835 for 2996 contacts (-77.4/contact) +
2D Compatibility (PS) -37769 + (NN) -9982 + (LL) 1324
1D Compatibility (HY) -39200 + (ID) 9600
Total energy: -327062.0 ( -109.17 by residue)
QMean score : 0.550
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