Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGR-KLIMSGGGRCNVTNR--RPAEEIIKH-I-----PGNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRMF----------------PV-----SNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYED-GHVKGVTLK---DG--QEISASAVIVAVGGKSVP------RTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDVSLSVLNAKGKPIITHQMDMIFTHFGVSG----PAALRCSMFVLRELKKTGAG-----TVKMRLDLFPNVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLL-EKADLEETAEYKQVSPKKIEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQS------KLMEGLFFCGEILD--ING--YTGGYNITCALVTGHTAGAYAAEVSNA |
| 2WDQ Chain:A ((7-424)) | -EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKT--GPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAG-VLVTEGCR----------GEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIRE--GRGCDGPWGPHAKLKL-DHLGKEVLES----------------R----LPG-I-LELSRTFAHVDPVK-------E------------PIPVIPTCHY-----MMGGIPTKVTG-QALTVNEKGEDVVVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139711 for 3195 contacts (-43.7/contact) +
2D Compatibility (PS) -38456 + (NN) -8369 + (LL) 5420
1D Compatibility (HY) -11200 + (ID) 3650
Total energy: -195966.0 ( -61.34 by residue)
QMean score : 0.439
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