Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQC-VGSNVDDLFRELNEKNQMDINRQVFEAETQATFIENSKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLEYFDAIITAEDVTRIKPEPDLFLEALRALDVKASESLIVEDSRNGLLAGNSAGVNVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
2GO7 Chain:A ((4-206))
-KTAFIWDLDGTLLDSYEAILSGIEETFAQ-FSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY------EGNHRIQALADI--SRIFET---
General information:
TITO was launched using:
RESULT:
Template:
2GO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89807 for 1621 contacts (-55.4/contact) +
2D Compatibility (PS) -21871 + (NN) -11393 + (LL) 664
1D Compatibility (HY) -10000 + (ID) 1750
Total energy: -134157.0 ( -82.76 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2GO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GO7-query.scw
PDB file :
Tito_Scwrl_2GO7.pdb
: