Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGY---YNGLSFHRVIKDFMIQSGDPNG-DGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
| 3PMP Chain:A ((11-163)) | ------------------------------------------------------------------------------INDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYG---------EKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVP--T----------------------SWLDGKHVVFGEVIEGLDIVRKVEGKGS-ASGKTNATIKITDCGTV------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -48465 for 1155 contacts (-42.0/contact) +
2D Compatibility (PS) -15745 + (NN) -4857 + (LL) 7480
1D Compatibility (HY) -7200 + (ID) 2950
Total energy: -71737.0 ( -62.11 by residue)
QMean score : 0.443
|
|
|