Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MAREFSLEKTRNIGIMAHIDAGKTTTTERILFYTGRIHKIGETHEGASQMDWMEQEQERGITITSAATTAQWKGYRVNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFVNKMDKIGADFLYSVGTLRDRLQANAHAIQLPIGAEDNFE--------------------GIIDLVENVAYFYEDDLGTRSDA----------------KEIPEEYKEQAEELRNSLIEAVCELDEELMDKYLEGEEITIDELKAGIR---KGTLNVEFYPVLVGSAFKN--KGVQLVLDAVLDYLPAPTDVAAIKGTR------PDTNEEIERHSSDEEPFSALAFKVMTDPYVG-KLTFFRVYSGTLDSGSYVKNSTKG---------KRERVGRILQMHANSREEISTVYAGDIAAAVGLKDT-TTGDTLCDEKDLVILESMEF-PEPVIDVAIEPKSKADQDKMGIALAKLAEEDPTFRTQTNPETGQTIISGMGELHLDIIVDRMKREF-KVEANVGAPQVAYRETFRTGAKVEGKFVRQSGGRGQFGHVWIEFEPNEEGAGFEFE-----------------------------------------NAIVGGVVP----REYIPAVQAGLEDALENGVLAGFPLIDIKAKLFDGSYH--DVDSNEMAFKVAASMALKNAVSKCNPVLLEPIMKVEVVIPEEYMGDIMGDITSRRGRVEGMEARGN--AQVVRAMVPLAEMFGYATALRSNTQGRGTFTMHMDHYEEVP------KSVAEEIIKKNKGE----------------- |
| 1N0V Chain:C ((2-842)) | VAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKGITIKSTAISLYSEMSDEDVK--EIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFARTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLHGWAFTIRQFATRYAKKFGVDKAKMMDRLWGDSFFNPKTKKWTNKDTDAEGKPLERAFNMFILDPIFRLFTAIMNFKKDEIPVLLEKLEIVLKGDEKDLEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAEQLYEGPADDANCIAIKNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQGPNYVPGKKDDLFIKAIQRVVLMMGRFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTSETAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMS-ESGEHIVAGTGELHLEICLQDLEHDHAGVPLKISPPVVAYRETVES----ESSQTALSKSPNKHNRIYLKAEPIDEEVSLAIENGIINPRDDFKARARIMADDYGWDVTDARKIWCFGPDGNGPNLVIDQTKAVQYLHEIKDSVVAAFQWATKEGPIFGEEMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYAGFLLADPKIQEPVFLVEIQCPEQAVGGIYSVLNKKRGQVVSEEQRPGTPLFTVKAYLPVNESFGFTGELRQATGGQAFPQMVFDHWSTLGSDPLDPTSKAGEIVLAARKRHGMKEEVPGWQEYYDKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145319 for 5551 contacts (-26.2/contact) +
2D Compatibility (PS) -72877 + (NN) -14206 + (LL) 344
1D Compatibility (HY) -32800 + (ID) 8300
Total energy: -273158.0 ( -49.21 by residue)
QMean score : 0.346
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