Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLELLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWIREFPSLGAAAY----PVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELTALTVEDG----------QPIRNIVEPAVDASIALLGPRS
3F0C Chain:A ((10-205))
-------------DGKLELIINAAQKRFAHYGLCKTTMNEIASDVGMGKASLYYYFPDKETLFEAVIKKEQNVFFDEMDKILNSGIDATALLKKYVKLRSLHFRHLLNLSKLRSDF---TKPVFAKAFESFKQKEVEIVAGIIQYGITTKEFKR----GNKHENAEFLVHLLLGVRMVKLKYKEINDFDESDYEDLDKNMCKVAGMFLKEIQT--
General information:
TITO was launched using:
RESULT:
Template:
3F0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90162 for 1275 contacts (-70.7/contact) +
2D Compatibility (PS) -19264 + (NN) -7295 + (LL) 1708
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -121213.0 ( -95.07 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3F0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0C-query.scw
PDB file :
Tito_Scwrl_3F0C.pdb
: