Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRRPLAESLERWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAYD----------------GLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 4TRR Chain:A ((9-251)) | ----------------------------------MSNLNGKTAVVTGAASGIGKEIALELAKAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEEAVNTGIDKVAEAFGSVDILVSNAGIQIVNPIENY--SFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA-SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQISEEEVIKKVMLGNTVDGVFTTVQDVAQTVLFLSAFP------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TRR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151538 for 1883 contacts (-80.5/contact) +
2D Compatibility (PS) -23911 + (NN) -9532 + (LL) 5676
1D Compatibility (HY) -8800 + (ID) 2700
Total energy: -190805.0 ( -101.33 by residue)
QMean score : 0.538
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