Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAANDI-TDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGLFTNAAKAKGHLDAGAKKVIISAPATDEDITIVLGVNDDKYDG-SQNIISNASCTTNCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPH-KDLRRARAAALNIVPTSTGAAKAIGLVMPQLKGKLDGYALRVPIPTGSVTDLTVDLSTRASVDEINAAFKAAAEGRLKGILKYYDAPIVSSDIVTDPHSSIFDSGLTKVID-DQAKVVSWYDNEWGYSNRLVDLVTLVGKSL |
| 3H9E Chain:O ((6-337)) | RELTVGINGFGRIGRLVLRACMEK------GVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEFRN-GQLVVDNHEISVYQCK-EPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSPD-APMFVMGVNENDYNPGSMNIVSNASCTTNCLAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVPTPDVSVVDLTCRLAQPAPYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYDNEYGYSHRVVDLLRYMFS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H9E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175484 for 2911 contacts (-60.3/contact) +
2D Compatibility (PS) -34934 + (NN) -10913 + (LL) 648
1D Compatibility (HY) -33600 + (ID) 7950
Total energy: -262233.0 ( -90.08 by residue)
QMean score : 0.528
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