Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLMPHSAALNAARRSADLTALADGGALDVIVIGGGITGVGIALDAATRGLTVALVEKHDLAFGTSRWSSKLVHGGLRYLASGNVGIARRSAVERGILMTRNAPHLVHAMPQLVPLLPSMGHTKRALVRAGFLAGDALRVLAGTPAATLPRSRRIPASRVVEIAPTVRRDGLDGGLLAYDGQLIDDARLVMAVARTAAQHGARILTYVGASNVTGTSVELTDRRTRQSFALSARAVINAAGVWAGEIDPSLRLRPS---RGTHLVFDAKSFANPTAALTIPIPGELNRFVFAMPEQLGRIYLGLTDEDAPGPIPDVPQPSSEEITFLLDTVNTALGTAVGTKDVIGAYAGLRPLIDTGGAGVQGRTADVSRDHAVFESPSGVISVVGGKLTEYRYMAEDVLNRAITLRHLRAAKCRTRNLPLIGAPANPGPAPGSGAGLPESLVARYGAEAANVAAAATCERPTEPVADGIDVTRAEFEYAVTHEGALDVDDILDRRTRIGLVPRDRERVVAVAKEFLSR |
3NYE Chain:A ((1-381)) | ------------HHHHHHPIEAD-----YLVIGAGIAGASTGYWLSAHGRVVVLEREAQPGYHSTGRSAAHYT--------------VAYGTPQVRALTAASRAFFDNPPAGFCEHPLLSPRP-EMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG--SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDCH-DWPMLVSLDESFYLKPDA-GMLLGSPANADPVEAHD--VQPEQLDIATGMYLIEEA------------------TTLTI----------------------RRPEHTWAGLRSFVA-----------------------DGDLVAG-YAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLPAHLRE-HGLDEAMLS------------------------PRRLSP----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145354 for 3377 contacts (-43.0/contact) +
2D Compatibility (PS) -38912 + (NN) -6851 + (LL) 9332
1D Compatibility (HY) -1200 + (ID) 3250
Total energy: -186235.0 ( -55.15 by residue)
QMean score : 0.340
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