Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKHHSKKAILKLTLITTSILLMHSNQVNAEEQELKNQEQSPVIANVAQQPSPSVTTNIVEKTSVTAASASNTAKEMGDTSVKNDKTEDELLEELSKNLDTSNLGADLEEEYPSKPETTNNKESNVVTNASTAIAQKVPSAYEEVKPESKSSLAVFDTSKITK-LQAITQRGKGNVVAIIDTGFDINHDIFRLDSPKDDKHSFKTKAEFEELKAKHNITYGKWVNDKIVFAHNYANNTETVADIAAAMKDGYGSEAKNISHGTHVAGIFVGNSKRPAI----NGLLLEGAAPNAQVLLMRIPDKIDSDKFGEAYAKAITDAVNLGAKTINMSLGKTADSLIALNDKVKLALKLASEKGVAVVVAAGNEGAFGMDYSKPLSTNPDYGTVNSPAISEDTLSVASYESLKTISEVVETTIEGKLVKLPIVTSKPFDKGKAYDVV-------------YANYGAKKDFEGKDFKGKIALIERGGGLDFMTKITHATNAGVVGIVIFNDQEKRGNFLIPYRELPVGVISKVDGERIKN-----TSSQLTFNQSFEVVDSQGGNRMLEQSSWGVTAE--GAIKPDVTASGFEIYSSTYN----------NQYQTMSGTSMASPHVAGLMTMLQSHLAEKYKGMNLDSKKLLELSKNILMSSATALYSEEDKAFYSPRQQGAGVVDAEKAIQAQYYVTG---------NDGKAKINLKRVGD---KFDITVTIHKLVEGVKELYYQANVATEQVNKGKFALKPQALLDTNWQKVILRD-K-ETQVRFTIDASQFSQKLKEQMANGYFLEGFVRFKEAKDSNQELMSIPFVGFNGDFANLQALETPIYKTLSKGSFYYKPNDTTHKDQLEYNESAPFESNNYTALLTQSASWGYVDYVKNGGELELAPESPKRIILGTFENKVEDKTIHLLERDAANNPYFAISPNKDGNRDEITPQATFLRNVKDISAQVLDQNGNVIWQSKVLPSYRKNFHNNPKQSDGHYRMDAFQWSGLDKDGKVVADGFYTYRLRYTPVAEGANSQESDFKVQVSTKSPNLPLLAQFDETNRTLSLAMPKESSYVPTYRLQLVLSHVVKDEEYGDETSYHYFHIDQEGKVTLPKTVKIGESEVAVDPKALTLVVEDKAGNFATVKLSDLLNKAVVSEKENAIVISNSFKYFDNLKKESMFISKEGKVVNKNLEEITLVKPQTTVTTQSLSKEITKSGNEKVLTSTNNNSSRVAKIISPKHNGDSVNHTLPSTSDRATNGLFVGTLALLSSLLLYLKPKKTKNNSK |
| 3VTA Chain:A ((5-618)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------WDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCET---------SNNFRCNRKIIGARSYHIGRPISPG-------DVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND--GCSDTDILAAYDDAIADGVDIISLSVGGANPRHY-FVDAIAIGSFHAVERGILTSNSAGNGGPNF---------------FTTASLSPWLLSVAASTMDRKFVTQVQIGNG---QSFQGVSINTF-DNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF----GPHEFFKSLDGAAGVLMTSNTRDY----ADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKST-TILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKT----YNPT--WSPAA----IKSALMTTASPMNAR--FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAP----QGLTISVN--------PNVLSFNGLGDRKSFTLTVRGSI----------KGFVVSASLVWSDG----VHYVRSPITITSL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VTA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120143 for 4953 contacts (-24.3/contact) +
2D Compatibility (PS) -57708 + (NN) -18724 + (LL) 39864
1D Compatibility (HY) -10000 + (ID) 4950
Total energy: -171661.0 ( -34.66 by residue)
QMean score : 0.378
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