Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLHFLYYCSEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD--VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEVMNSEEKTKNGVVKGQPSPSGAAVNSSESLPPSSSVNDISSMSTDQTLASDTDSSLEASAGPLGCCR |
| 3EB0 Chain:A ((6-373)) | ------------------------------------------------------------SKKYSLGKTLGTG-FGIVCEVFDIESGKRFALKKVLQ---DPRY---KNRELDIMKVLDHVNIIKLVDYFYTT-------NKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY--V--RFPTLKAKDWRKILPEGT-----------PSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS------IPQLFNFSPYELSIIPGNVLNRILPK------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211237 for 2330 contacts (-90.7/contact) +
2D Compatibility (PS) -32463 + (NN) -17837 + (LL) 8364
1D Compatibility (HY) -27200 + (ID) 5100
Total energy: -285473.0 ( -122.52 by residue)
QMean score : 0.422
|
|
|