Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAVYMNGGGLVNPHYARWDRRDSVESGCQTESSKEGEEGQPRQLTPFEKLTQDMSQDEKVVREITLGKRIGFYRIRG-EIGSGNFSQVKLGIHSLTKEKVAIKILDKTKLDQKTQRLLSREISSMEK-LHHPNIIRLYEVVET----LSKLHLVMEYAGGGELFGKISTEGK-LSEPESKLIFSQIVSAVKHMHENQIIHRDLKAENVFYTS---NTCVKVGDFGFSTVSKKGEMLNTFCGSPPYAAPELFRDEHYIGIYVDIWALGVLLYFMVTGTMPFRAETV----AKLKKSILEGTYSVPP----HVSEPCHRLIRGVLQQIPTERYGIDCIMNDEWMQGVPYPTPLEPFQLDPKHLSE-TSTLKEEENEVKSTLEHLGITEEHIRNNQGRDARSSITGVYRIILHRVQRKKALESVPVMMLPDPKERDLKKGSRVYRGIRHTSKFCSIL |
1NXK Chain:A ((55-345)) | -----------------------------------------------------------------KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR--AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT-----------PYYVAPEVLGPEKY-DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK-VPQTPLHT-SRVLKED------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138773 for 1953 contacts (-71.1/contact) +
2D Compatibility (PS) -26946 + (NN) -5817 + (LL) 10320
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -185666.0 ( -95.07 by residue)
QMean score : 0.399
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